LINC00678

Across TCGA patient cohorts, LINC00678 RNA expression is significantly associated with the RNA expression of many other genes, with 7,450 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC00678-associated genes across cancer lineages are TCF4-AS2, CHCHD4P5, and TUBG1P. Each is linked with LINC00678 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC00678-to-partner and partner-to-LINC00678 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00678 versus TCF4-AS2 in LAML, with a Pearson correlation of 0.32.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00678→partner) and Y-score (partner→LINC00678) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LAML	TCF4-AS2 →	+0.751	+0.284	<.001	.001	3	11
LAML	CHCHD4P5 →	+0.910	+0.335	<.001	<.001	3	11
LAML	TUBG1P →	+0.908	+0.377	<.001	<.001	3	11
COAD	MIR548K →	+0.572	+0.100	<.001	<.001	3	10
LAML	RNVU1-33 →	+0.738	+0.376	<.001	<.001	3	10
LAML	MORF4L1P4 →	+0.575	+0.296	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,450 associations by consensus.

LINC00678 vs TCF4-AS2 — LAML

Explore this scatter interactively →