LINC00589

Across TCGA patient cohorts, LINC00589 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,750 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC00589-associated proteins across cancer lineages are CRACDL_S490, AGR2, and KIF13B. Each is linked with LINC00589 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00589-to-partner and partner-to-LINC00589 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00589 versus CRACDL_S490 in UCEC, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00589→partner) and Y-score (partner→LINC00589) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	CRACDL_S490 →	+0.623	+0.570	<.001	<.001	3	4
COAD	AGR2 →	+1.166	+0.491	<.001	.006	3	4
BRCA	KIF13B →	+0.466	+0.705	<.001	<.001	3	4
GBM	LRRFIP1 →	+0.480	+0.298	<.001	<.001	3	4
LUAD	TPRN_S241 →	+0.706	+0.606	.004	<.001	3	3
LUAD	TRAF2 →	+0.365	+0.563	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,750 associations by consensus.

LINC00589 vs CRACDL_S490 — UCEC

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