LINC00544

Across TCGA patient cohorts, LINC00544 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,524 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00544-associated proteins across cancer lineages are SEPTIN1, FYB1, and NFATC2. Each is linked with LINC00544 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC00544-to-partner and partner-to-LINC00544 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00544 versus SEPTIN1 in UCEC, with a Pearson correlation of 0.23.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00544→partner) and Y-score (partner→LINC00544) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	SEPTIN1 →	+0.698	+0.442	<.001	.006	2	9
HNSC	FYB1 →	+0.641	+0.455	<.001	.005	3	8
HNSC	NFATC2 →	+0.598	+0.627	<.001	<.001	3	7
LSCC	HCLS1 →	+0.610	+0.279	<.001	<.001	3	7
HNSC	PSMB10 →	+0.471	+0.335	<.001	.008	3	7
LSCC	RASAL3 →	+0.350	+0.274	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,524 associations by consensus.

LINC00544 vs SEPTIN1 — UCEC

Explore this scatter interactively →