Across TCGA patient cohorts, LINC00488 mutation is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00488-associated genes across cancer lineages are F8A2, MLECP1, and MIR6076. Each is linked with LINC00488 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00488-to-partner and partner-to-LINC00488 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00488→partner) and Y-score (partner→LINC00488) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	F8A2 →	+0.097	+6.279	<.001	<.001	3	1
UCEC	MLECP1 →	+0.108	+5.226	.005	.003	3	1
UCEC	MIR6076 →	+0.747	+4.552	<.001	.005	3	1
UCEC	RNU6-366P →	+0.532	+5.226	<.001	.003	3	1
UCEC	RNU6-739P →	+0.534	+4.852	<.001	.006	3	1
UCEC	RNA5SP407 →	+0.488	+4.852	<.001	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

Exploration

LINC00488 survival (RNA) · tumor vs normal (RNA) · all LINC00488 data types