LINC00477

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00477 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,598 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00477-associated proteins across cancer lineages are DAP3, PPP1R14A_S128, and PSMC1. Each is linked with LINC00477 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00477-to-partner and partner-to-LINC00477 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00477→partner) and Y-score (partner→LINC00477) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADDAP3 →-0.314-0.020.007.00332
GBMPPP1R14A_S128 →+0.891+0.176<.001<.00132
GBMPSMC1 →-0.228-0.111<.001<.00132
LUADMEOX2_S155 →-0.626-0.127<.001<.00132
LUADMAST4_S1523 →-0.441-0.131<.001.00132
GBMMYO5A_S1452 →+0.559+0.108<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,598 associations by consensus.

Exploration