LINC00477

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00477 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,508 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00477-associated GO terms across cancer lineages are Regulation of intracellular protein transport, Immune system development, and Regulation of proteasomal ubiquitin-dependent protein catabolic process. Each is linked with LINC00477 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC00477-to-partner and partner-to-LINC00477 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00477→partner) and Y-score (partner→LINC00477) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRegulation of intracellular protein transport →+0.063+0.189<.001<.001316
ESCAImmune system development →+0.072+0.208<.001.001315
ESCARegulation of proteasomal ubiquitin-dependent protein catabolic process →+0.083+0.275<.001.001315
STADPositive regulation of viral process →+0.064+0.177<.001<.001315
STADNegative regulation of transferase activity →+0.057+0.184<.001<.001315
ESCARegulation of proteasomal protein catabolic process →+0.084+0.244<.001.001315
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,508 associations by consensus.

Exploration