LINC00399

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00399 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,677 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00399-associated GO terms across cancer lineages are Obsolete cellular response to extracellular stimulus, Regulation of lipid biosynthetic process, and Protein dephosphorylation. Each is linked with LINC00399 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC00399-to-partner and partner-to-LINC00399 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00399→partner) and Y-score (partner→LINC00399) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADObsolete cellular response to extracellular stimulus →+0.040+0.122<.001<.001310
STADRegulation of lipid biosynthetic process →+0.033+0.129<.001<.001310
STADProtein dephosphorylation →+0.043+0.140<.001<.001310
STADTORC1 signaling →+0.047+0.134<.001<.00139
STADRegulation of JUN kinase activity →+0.042+0.140<.001<.00139
STADNegative regulation of neuron apoptotic process →+0.033+0.129<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,677 associations by consensus.

Exploration