LINC00391

Across TCGA patient cohorts, LINC00391 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,213 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00391-associated proteins across cancer lineages are RGS3, RGS3_S806, and SENP2_S344. Each is linked with LINC00391 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00391-to-partner and partner-to-LINC00391 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00391 versus RGS3 in GBM, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00391→partner) and Y-score (partner→LINC00391) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RGS3 →	-0.372	-0.629	<.001	.002	3	3
LSCC	RGS3_S806 →	-0.564	-0.362	<.001	.001	3	3
LSCC	SENP2_S344 →	+0.553	+0.324	<.001	<.001	3	3
LSCC	KIF21A_S1239 →	+0.913	+0.443	<.001	<.001	3	3
GBM	LDLRAP1 →	-0.684	-0.692	<.001	<.001	3	3
LSCC	FAM117B_S307 →	+0.656	+0.412	.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,213 associations by consensus.

LINC00391 vs RGS3 — GBM

Explore this scatter interactively →