LINC00345

Across TCGA patient cohorts, LINC00345 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,637 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC00345-associated proteins across cancer lineages are ITGA1, CDC42EP1, and PDGFRL. Each is linked with LINC00345 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00345-to-partner and partner-to-LINC00345 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00345 versus ITGA1 in OV, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00345→partner) and Y-score (partner→LINC00345) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	ITGA1 →	+0.511	+0.181	<.001	.003	3	5
OV	CDC42EP1 →	+0.509	+0.148	<.001	.005	3	4
BRCA	PDGFRL →	+0.598	+0.130	.001	.003	3	4
CCRCC	PPFIBP1 →	+0.263	+0.594	.001	<.001	3	4
OV	CALHM5 →	+0.703	+0.222	<.001	.002	3	3
OV	CNN2 →	+0.635	+0.155	<.001	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,637 associations by consensus.

LINC00345 vs ITGA1 — OV

Explore this scatter interactively →