Across TCGA patient cohorts, LINC00243 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,190 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00243-associated proteins across cancer lineages are ACAP1, PTPRC, and RASAL3_S72. Each is linked with LINC00243 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC00243-to-partner and partner-to-LINC00243 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00243→partner) and Y-score (partner→LINC00243) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ACAP1 →	+0.773	+0.334	<.001	<.001	3	7
GBM	PTPRC →	+0.641	+0.291	<.001	<.001	3	6
OV	RASAL3_S72 →	+0.717	+0.169	<.001	.002	3	6
UCEC	SASH3 →	+0.582	+0.590	<.001	<.001	3	6
OV	SPN →	+0.804	+0.242	<.001	<.001	3	6
OV	STK4 →	+0.299	+0.148	<.001	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,190 associations by consensus.

Exploration

LINC00243 survival (RNA) · tumor vs normal (RNA) · all LINC00243 data types