LINC00200

Across TCGA patient cohorts, LINC00200 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,549 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00200-associated proteins across cancer lineages are RPL29, CTNND1, and TNKS1BP1. Each is linked with LINC00200 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00200-to-partner and partner-to-LINC00200 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00200 versus RPL29 in GBM, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00200→partner) and Y-score (partner→LINC00200) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RPL29 →	-0.495	-0.190	<.001	.002	3	3
GBM	CTNND1 →	-0.227	-0.232	<.001	<.001	3	3
HNSC	TNKS1BP1 →	-0.334	-0.316	.001	.001	3	3
HNSC	PPP1R13L →	-0.598	-0.324	<.001	.001	3	3
HNSC	ZFP36_S186 →	-0.430	-0.363	<.001	.002	3	2
HNSC	ZNF185_S153 →	-1.157	-0.510	.001	.009	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,549 associations by consensus.

LINC00200 vs RPL29 — GBM

Explore this scatter interactively →