LINC00200

Across TCGA patient cohorts, LINC00200 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00200-associated genes across cancer lineages are RNU6-1234P, TRAJ57, and MTATP6P20. Each is linked with LINC00200 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00200-to-partner and partner-to-LINC00200 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1234P grouped by LINC00200-low versus LINC00200-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00200→partner) and Y-score (partner→LINC00200) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNU6-1234P →	+0.592	+4.484	<.001	.009	3	2
UCEC	TRAJ57 →	+1.200	+4.903	<.001	.002	3	1
UCEC	MTATP6P20 →	+0.401	+4.211	<.001	.009	3	1
UCEC	RAB11AP2 →	+0.217	+6.049	<.001	.001	3	1
UCEC	FRG2HP →	+0.171	+5.943	<.001	<.001	3	1
UCEC	SNORA74C-1 →	+0.496	+4.256	.007	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

RNU6-1234P by LINC00200 expression — UCEC

Explore this box plot interactively →