LCE1F

Across TCGA cell cohorts, LCE1F RNA expression is significantly associated with the mutation status of many other genes, with 205 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible LCE1F-associated genes across cancer lineages are SIPA1L2, PDE4B, and CDH7. Each is linked with LCE1F in more than 2 cancer types. Because this analysis shows association rather than direction, both LCE1F-to-partner and partner-to-LCE1F results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SIPA1L2 grouped by LCE1F-low versus LCE1F-high in LUNG_NSCLC_LUAD.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LCE1F→partner) and Y-score (partner→LCE1F) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUAD	SIPA1L2 →	+3.925	+0.072	<.001	<.001	3	3
BLOOD_Myeloma	PDE4B →	+4.807	+0.166	.006	<.001	3	2
OESOPHAGUS	CDH7 →	+4.906	+0.330	.006	<.001	3	2
OESOPHAGUS	LAMB4 →	+4.906	+0.330	.006	<.001	3	2
KIDNEY	MYO9B →	+5.000	+0.226	.005	<.001	3	2
LUNG_SCLC	GOLGA3 →	+4.058	+0.086	.007	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 205 associations by consensus.

SIPA1L2 by LCE1F expression — LUNG_NSCLC_LUAD

Explore this box plot interactively →