LARP1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LARP1 mutation is significantly associated with the total protein of many other genes, with 46 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LARP1-associated genes across cancer lineages are Caspase-7-cleavedD198, INPP4B, and mTOR_pS2448. Each is linked with LARP1 in more than 2 cancer types. Because this analysis shows association rather than direction, both LARP1-to-partner and partner-to-LARP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by LARP1-low versus LARP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LARP1→partner) and Y-score (partner→LARP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.575+1.827.001.00233
UCECINPP4B →-0.196-2.169.042.00232
UCECmTOR_pS2448 →-0.166-2.308<.001<.00132
UCECNotch1 →+0.127+1.375.002.02032
UCECPCNA →+0.247+2.321<.001<.00132
UCECPKC-b-II_pS660 →-0.241-1.184.003.02232
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

Caspase-7-cleavedD198 by LARP1 expression — UCEC

Box plot of Caspase-7-cleavedD198 in LARP1-low vs LARP1-high samples in UCEC.

Explore this box plot interactively →

Exploration