KRTAP4-11

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KRTAP4-11 RNA expression is significantly associated with the mutation status of many other genes, with 146 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible KRTAP4-11-associated genes across cancer lineages are PTPRO, SLC12A6, and SHMT2. Each is linked with KRTAP4-11 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP4-11-to-partner and partner-to-KRTAP4-11 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP4-11→partner) and Y-score (partner→KRTAP4-11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaPTPRO →+3.539+0.013.002<.00132
BLOOD_LymphomaSLC12A6 →+5.209+0.035.005<.00132
BLOOD_LymphomaSHMT2 →+5.209+0.045.005<.00132
SKINRGS3 →+4.415+0.014.007<.00132
SOFT_TISSUEAPC →+3.142+0.065.008<.00131
SOFT_TISSUEHMCN2 →+4.142+0.099.003<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 146 associations by consensus.

Exploration