KRTAP21-1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KRTAP21-1 mutation is significantly associated with the RNA expression of many other genes, with 176 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible KRTAP21-1-associated genes across cancer lineages are UBE2U, ACTR3B, and THEM4. Each is linked with KRTAP21-1 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP21-1-to-partner and partner-to-KRTAP21-1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP21-1→partner) and Y-score (partner→KRTAP21-1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINUBE2U →+0.159+2.707.003.00332
LUNG_NSCLC_LUADACTR3B →+0.530+3.169.001.00832
LUNG_NSCLC_LUADTHEM4 →+0.824+2.524<.001<.00132
LUNG_NSCLC_LUADMAT2A →+0.502+3.473.001<.00132
LUNG_NSCLC_LUADZNF786 →+0.375+2.056.005.00532
LUNG_NSCLC_LUSCCBLL2 →+0.013+3.514.002.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 176 associations by consensus.

Exploration