KRT18P18

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRT18P18 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,721 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KRT18P18-associated proteins across cancer lineages are RFC3, SMARCA4, and HMGB3. Each is linked with KRT18P18 in more than 4 cancer types. Because this analysis shows association rather than direction, both KRT18P18-to-partner and partner-to-KRT18P18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KRT18P18 versus RFC3 in GBM, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KRT18P18→partner) and Y-score (partner→KRT18P18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRFC3 →+0.363+0.372.001<.00135
LSCCSMARCA4 →+0.429+0.460<.001<.00135
LUADHMGB3 →+0.699+0.292.004.00335
LSCCPPM1G →+0.275+0.322<.001<.00135
GBMWDHD1_S407 →+0.907+0.362<.001.00135
LSCCWDR70 →+0.480+0.455<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,721 associations by consensus.

KRT18P18 vs RFC3 — GBM

Per-sample scatter of KRT18P18 vs RFC3 in GBM (Pearson r = 0.41).

Explore this scatter interactively →

Exploration