KLHL41

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLHL41 mutation is significantly associated with the RNA expression of many other genes, with 1,047 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KLHL41-associated genes across cancer lineages are MTCO2P20, RNU6ATAC30P, and RAB42P1. Each is linked with KLHL41 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHL41-to-partner and partner-to-KLHL41 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTCO2P20 grouped by KLHL41-low versus KLHL41-high in READ.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHL41→partner) and Y-score (partner→KLHL41) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
READMTCO2P20 →+0.095+5.039<.001.00832
BRCARNU6ATAC30P →+0.589+5.231<.001.00132
LIHCRAB42P1 →+0.133+5.447<.001.00532
SKCMLINC02374 →+0.041+5.867<.001.00332
UCECRN7SL134P →+0.169+2.599<.001<.00132
UCECLINC01670 →+0.073+1.843<.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,047 associations by consensus.

MTCO2P20 by KLHL41 expression — READ

Box plot of MTCO2P20 in KLHL41-low vs KLHL41-high samples in READ.

Explore this box plot interactively →

Exploration