KHNYN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KHNYN protein abundance is significantly associated with the RNA expression of many other genes, with 6,486 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KHNYN-associated genes across cancer lineages are HOMEZ, FKBP3, and GMPR2. Each is linked with KHNYN in more than 5 cancer types. Because this analysis shows association rather than direction, both KHNYN-to-partner and partner-to-KHNYN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KHNYN versus HOMEZ in LSCC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KHNYN→partner) and Y-score (partner→KHNYN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCHOMEZ →+0.525+0.201<.001.00136
LSCCFKBP3 →+0.518+0.218<.001.00135
BRCAGMPR2 →+0.421+0.282<.001<.00135
UCECC14orf119 →+0.568+0.118<.001.00935
LSCCJKAMP →+0.371+0.277<.001<.00135
UCECHECTD1 →+0.595+0.248<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,486 associations by consensus.

KHNYN vs HOMEZ — LSCC

Per-sample scatter of KHNYN vs HOMEZ in LSCC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration