KDM8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KDM8 mutation is significantly associated with the RNA expression of many other genes, with 3,935 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KDM8-associated genes across cancer lineages are RN7SL371P, GAGE2E, and RN7SL302P. Each is linked with KDM8 in more than 2 cancer types. Because this analysis shows association rather than direction, both KDM8-to-partner and partner-to-KDM8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL371P grouped by KDM8-low versus KDM8-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM8→partner) and Y-score (partner→KDM8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCRN7SL371P →+0.160+5.792<.001.00333
SKCMGAGE2E →+0.731+2.947<.001.00232
SKCMRN7SL302P →+0.056+3.069.001.00932
COADTRGJP2 →+0.968+3.489<.001.00532
UCECTRAJ57 →+0.304+1.926.001.00232
UCECNOP14-AS1 →+0.291+1.975.006.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,935 associations by consensus.

RN7SL371P by KDM8 expression — LUSC

Box plot of RN7SL371P in KDM8-low vs KDM8-high samples in LUSC.

Explore this box plot interactively →

Exploration