KCNMB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNMB1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,710 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KCNMB1-associated genes across cancer lineages are HNRNPD, ELF2, and RIPOR2. Each is linked with KCNMB1 in more than 2 cancer types. Because this analysis shows association rather than direction, both KCNMB1-to-partner and partner-to-KCNMB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNMB1 versus HNRNPD in LSCC, with a Pearson correlation of -0.58.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNMB1→partner) and Y-score (partner→KCNMB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCHNRNPD →-0.589-1.237.001<.00133
LSCCELF2 →-0.512-1.540.001.00132
COADRIPOR2 →+0.575+0.698<.001<.00132
LSCCFBXO9 →-0.732-1.451.003<.00132
LSCCBICRAL →-0.686-1.718.003<.00132
LSCCACVR2B →-1.070-1.691<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,710 associations by consensus.

KCNMB1 vs HNRNPD — LSCC

Per-sample scatter of KCNMB1 vs HNRNPD in LSCC (Pearson r = -0.58).

Explore this scatter interactively →

Exploration