KCNIP4-IT1

Across TCGA patient cohorts, KCNIP4-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,375 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KCNIP4-IT1-associated proteins across cancer lineages are CASP4, CRMP1, and MARK1. Each is linked with KCNIP4-IT1 in more than 3 cancer types. Because this analysis shows association rather than direction, both KCNIP4-IT1-to-partner and partner-to-KCNIP4-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNIP4-IT1 versus CASP4 in HNSC, with a Pearson correlation of -0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNIP4-IT1→partner) and Y-score (partner→KCNIP4-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CASP4 →	-0.797	-1.469	<.001	<.001	3	4
HNSC	CRMP1 →	+0.949	+1.425	<.001	<.001	3	4
CCRCC	MARK1 →	+0.398	+0.450	.001	<.001	3	4
CCRCC	ZC3H12A →	-0.556	-0.550	<.001	<.001	3	4
GBM	UBE2O →	+0.227	+1.385	<.001	<.001	3	3
LSCC	UCHL1 →	+1.025	+1.170	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,375 associations by consensus.

KCNIP4-IT1 vs CASP4 — HNSC

Explore this scatter interactively →