KCNIP4-IT1

associated omics data
KCNIP4 intronic transcript 1Genealiases: NCRNA00099 · UM9(5) · UM9-5

Q-omics provides the consensus-scored KCNIP4-IT1 profile across patient tissues and cancer cell-line models. KCNIP4-IT1 expression is associated with patient survival in 14 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, KCNIP4-IT1 is differentially expressed in 2, with the highest sampling consensus in LUSC. Additionally, KCNIP4-IT1 RNA expression shows 13,375 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight KIRP, LUSC, and LSCC as cancer lineages where KCNIP4-IT1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes KCNIP4-IT1 survival associations across molecular data types. KCNIP4-IT1 RNA expression shows survival associations in the most cancer types (14). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
KCNIP4-IT1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier14KIRP (51)view →
This table ranks reproducible KCNIP4-IT1 RNA expression–survival associations across cancer types. High KCNIP4-IT1 expression shows unfavorable associations in KIRP, HNSC, LIHC, THYM and CHOL, but favorable associations in LAML. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .003). Together, the overview and detailed table identify KIRP as the clearest survival context for KCNIP4-IT1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPOSTertileAll0.3290.756.00351view →
HNSCDFSTertileAll0.6470.712.00948view →
LIHCOSTertileAll0.5290.792.00745view →
THYMDFSTertileII,III,IV0.1800.753<.00142view →
LAMLDFSMedianAll0.6360.250<.00136view →
CHOLOSTertileII,III,IV0.0190.675<.00136view →
Pink = unfavorable, green = favorable. all 14 lineages →

KCNIP4-IT1-KIRP (OS)

Kaplan–Meier survival curve for KCNIP4-IT1 RNA expression in KIRP: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes KCNIP4-IT1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 2. The strongest signals are observed in LUSC for RNA.
KCNIP4-IT1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot2LUSC (5)view →
This table ranks reproducible tumor–normal expression differences for KCNIP4-IT1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. KCNIP4-IT1 shows higher tumor expression in LUSC and HNSC. The LUSC box plot shows higher KCNIP4-IT1 RNA expression in tumor versus normal tissue (log2 FC = +0.011, t-test p = .003).
LineageGenderStageFold-changepSampling consensus
LUSCAllAll+0.011.0035view →
HNSCMaleII,III,IV+0.005.0164view →
Green = repressed in tumor. all 2 lineages →

KCNIP4-IT1-LUSC

Tumor-vs-normal expression box plot for KCNIP4-IT1 in LUSC.

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Cross-omics associations

This table shows molecular features associated with KCNIP4-IT1 in patient tissues and cancer cell lines. In patient samples, KCNIP4-IT1 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)13,375LSCC (4270)view →
Function (RNA)6,373STAD (5281)view →