KCND3-IT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCND3-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,073 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible KCND3-IT1-associated proteins across cancer lineages are GNAO1, CRMP1, and HDGFL3. Each is linked with KCND3-IT1 in more than 3 cancer types. Because this analysis shows association rather than direction, both KCND3-IT1-to-partner and partner-to-KCND3-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCND3-IT1 versus GNAO1 in LUAD, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KCND3-IT1→partner) and Y-score (partner→KCND3-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADGNAO1 →+0.482+0.591<.001<.00134
BRCACRMP1 →+0.658+0.159<.001.00434
BRCAHDGFL3 →+0.541+0.123.004.00334
BRCATLE5 →+0.284+0.122.001.00334
PDACTOP2A_S1247 →-0.797-0.569.002.00434
LSCCUTP15 →-0.240-0.407.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,073 associations by consensus.

KCND3-IT1 vs GNAO1 — LUAD

Per-sample scatter of KCND3-IT1 vs GNAO1 in LUAD (Pearson r = 0.36).

Explore this scatter interactively →

Exploration