JMJD7-PLA2G4B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, JMJD7-PLA2G4B mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible JMJD7-PLA2G4B-associated genes across cancer lineages are DEFA4, TBC1D21, and WDR87. Each is linked with JMJD7-PLA2G4B in more than 1 cancer types. Because this analysis shows association rather than direction, both JMJD7-PLA2G4B-to-partner and partner-to-JMJD7-PLA2G4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DEFA4 grouped by JMJD7-PLA2G4B-low versus JMJD7-PLA2G4B-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JMJD7-PLA2G4B→partner) and Y-score (partner→JMJD7-PLA2G4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEDEFA4 →+0.026+4.022<.001.00631
LARGE_INTESTINETBC1D21 →+0.010+4.022<.001.00631
LARGE_INTESTINEWDR87 →+0.021+3.453<.001.00931
LARGE_INTESTINEACSM6 →+0.023+3.658<.001.00531
UPPER_AERODIGESTIVE_TRACTMPC1L →+0.045+4.510<.001.00331
BLOOD_LeukemiaTSSK1B →+0.011+3.874<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

DEFA4 by JMJD7-PLA2G4B expression — LARGE_INTESTINE

Box plot of DEFA4 in JMJD7-PLA2G4B-low vs JMJD7-PLA2G4B-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration