INPP5K

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, INPP5K protein abundance is significantly associated with the RNA expression of many other genes, with 5,215 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible INPP5K-associated genes across cancer lineages are ACAP1, SLC2A1, and CLEC9A. Each is linked with INPP5K in more than 3 cancer types. Because this analysis shows association rather than direction, both INPP5K-to-partner and partner-to-INPP5K results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, INPP5K versus ACAP1 in UCEC, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (INPP5K→partner) and Y-score (partner→INPP5K) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECACAP1 →+0.554+0.171.003.00734
LSCCSLC2A1 →-1.393-0.207<.001<.00134
CCRCCCLEC9A →+0.600+0.184<.001.00334
LSCCMYO1C →+0.485+0.217.001<.00134
COADRABEP1 →+0.518+0.256<.001.00434
HNSCPAFAH1B1 →+0.478+0.242.002<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,215 associations by consensus.

INPP5K vs ACAP1 — UCEC

Per-sample scatter of INPP5K vs ACAP1 in UCEC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration