IGLV1-41

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV1-41 mutation is significantly associated with the RNA expression of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IGLV1-41-associated genes across cancer lineages are CCDC75P1, RNU6-805P, and MIR6816. Each is linked with IGLV1-41 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGLV1-41-to-partner and partner-to-IGLV1-41 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCDC75P1 grouped by IGLV1-41-low versus IGLV1-41-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV1-41→partner) and Y-score (partner→IGLV1-41) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCCDC75P1 →+0.055+4.563.006.00432
SKCMRNU6-805P →+0.265+4.771<.001.00632
SKCMMIR6816 →+0.418+4.594<.001.00832
HNSCRNU6-1325P →+0.338+7.954<.001.00831
HNSCMIR512-2 →+0.363+7.954<.001.00831
HNSCRNU7-51P →+0.512+7.954<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

CCDC75P1 by IGLV1-41 expression — SKCM

Box plot of CCDC75P1 in IGLV1-41-low vs IGLV1-41-high samples in SKCM.

Explore this box plot interactively →

Exploration