IGKV3OR22-2

associated omics data
immunoglobulin kappa variable 3/OR22-2 (pseudogene)Genealiases: IGKV3OR222 · IGKVP3

Q-omics provides the consensus-scored IGKV3OR22-2 profile across patient tissues and cancer cell-line models. IGKV3OR22-2 expression is associated with patient survival in 13 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, IGKV3OR22-2 is differentially expressed in 6, with the highest sampling consensus in LUAD. Additionally, IGKV3OR22-2 RNA expression shows 6,125 significant pathway-activity associations, with the highest sampling consensus in HNSC. Together, these results highlight UVM, LUAD, and HNSC as cancer lineages where IGKV3OR22-2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV3OR22-2 survival associations across molecular data types. IGKV3OR22-2 RNA expression shows survival associations in the most cancer types (13). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV3OR22-2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier13UVM (99)view →
This table ranks reproducible IGKV3OR22-2 RNA expression–survival associations across cancer types. High IGKV3OR22-2 expression shows unfavorable associations in UVM and LGG, but favorable associations in SKCM, HNSC, STAD and MESO. The UVM Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for IGKV3OR22-2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSTertileAll0.1040.858<.00199view →
SKCMOSTertileIII,IV0.7020.248.00242view →
HNSCOSQuartileAll0.7790.652.01140view →
STADOSTertileII,III,IV0.7010.488.03527view →
MESOOSTertileIII,IV0.5320.293.01918view →
LGGOSTertileAll0.1900.450.00818view →
Pink = unfavorable, green = favorable. all 13 lineages →

IGKV3OR22-2-UVM (OS)

Kaplan–Meier survival curve for IGKV3OR22-2 RNA expression in UVM: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV3OR22-2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 6. The strongest signals are observed in LUAD for RNA.
IGKV3OR22-2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot6LUAD (7)view →
This table ranks reproducible tumor–normal expression differences for IGKV3OR22-2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV3OR22-2 shows lower tumor expression in BRCA, LIHC, COAD, STAD and READ and higher tumor expression in LUAD. The LUAD box plot shows higher IGKV3OR22-2 RNA expression in tumor versus normal tissue (log2 FC = +0.479, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUADAllAll+0.479<.0017view →
BRCAFemaleAll−0.086.0084view →
LIHCAllII,III,IV−0.044.0242view →
COADAllIV−0.770.0281view →
STADMaleAll−0.482.0461view →
READAllAll−0.436.0221view →
Green = repressed in tumor. all 6 lineages →

IGKV3OR22-2-LUAD

Tumor-vs-normal expression box plot for IGKV3OR22-2 in LUAD.

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Cross-omics associations

This table shows molecular features associated with IGKV3OR22-2 in patient tissues and cancer cell lines. In patient samples, IGKV3OR22-2 shows the broadest associations at the RNA and protein expression levels, with HNSC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,125HNSC (2811)view →
RNA4,546LIHC (1586)view →