IGKV2D-40

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV2D-40 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of IGKV2D-40’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where IGKV2D-40 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types IGKV2D-40 is over-expressed in tumor, although a few such as COAD and BRCA show the opposite, repressed pattern.

LUAD, COAD, and BRCA are the cancer types where IGKV2D-40 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV2D-40 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADFemaleAll+1.979<.0018view →
COADFemaleIII,IV−3.110<.0016view →
BRCAFemaleII,III,IV−0.611.0354view →
LIHCMaleAll−0.894.0013view →
READFemaleAll−1.938.0252view →
ESCAAllAll+1.567.0112view →
HNSCAllIII,IV+1.152.0371view →
KIRCAllAll+0.599.0151view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

IGKV2D-40–LUAD

Tumor-vs-normal expression box plot for IGKV2D-40 RNA in LUAD.

Open the LUAD breakdown →

Exploration