IGKV2D-40

associated omics data
immunoglobulin kappa variable 2D-40Genealiases: IGKV2D40 · O1

Q-omics provides the consensus-scored IGKV2D-40 profile across patient tissues and cancer cell-line models. IGKV2D-40 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV2D-40 is differentially expressed in 8, with the highest sampling consensus in LUAD. Additionally, IGKV2D-40 RNA expression shows 8,980 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight HNSC, LUAD, and LSCC as cancer lineages where IGKV2D-40 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2D-40 survival associations across molecular data types. IGKV2D-40 RNA expression shows survival associations in the most cancer types (23). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2D-40 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23HNSC (144)view →
This table ranks reproducible IGKV2D-40 RNA expression–survival associations across cancer types. High IGKV2D-40 expression shows unfavorable associations in KIRP, but favorable associations in HNSC, SKCM, BRCA, CESC and CHOL. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV2D-40 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSMedianAll0.7410.580<.001144view →
SKCMOSTertileAll0.4340.271<.001108view →
BRCAOSQuartileAll0.6230.532<.00164view →
CESCOSTertileAll0.8770.712.00250view →
KIRPOSQuartileAll0.3310.780<.00127view →
CHOLDFSTertileAll0.7660.227.00124view →
Pink = unfavorable, green = favorable. all 23 lineages →

IGKV2D-40-HNSC (OS)

Kaplan–Meier survival curve for IGKV2D-40 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV2D-40 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in LUAD for RNA.
IGKV2D-40 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8LUAD (8)view →
This table ranks reproducible tumor–normal expression differences for IGKV2D-40. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV2D-40 shows lower tumor expression in COAD, BRCA, LIHC and READ and higher tumor expression in LUAD and ESCA. The LUAD box plot shows higher IGKV2D-40 RNA expression in tumor versus normal tissue (log2 FC = +1.979, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUADFemaleAll+1.979<.0018view →
COADFemaleIII,IV−3.110<.0016view →
BRCAFemaleII,III,IV−0.611.0354view →
LIHCMaleAll−0.894.0013view →
READFemaleAll−1.938.0252view →
ESCAAllAll+1.567.0112view →
Green = repressed in tumor. all 8 lineages →

IGKV2D-40-LUAD

Tumor-vs-normal expression box plot for IGKV2D-40 in LUAD.

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Cross-omics associations

This table shows molecular features associated with IGKV2D-40 in patient tissues and cancer cell lines. In patient samples, IGKV2D-40 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)8,980LSCC (2864)view →
RNA8,213TGCT (2932)view →