IGKV2D-30

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGKV2D-30 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,769 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IGKV2D-30-associated proteins across cancer lineages are MZB1, CD38, and IL16. Each is linked with IGKV2D-30 in more than 9 cancer types. Because this analysis shows association rather than direction, both IGKV2D-30-to-partner and partner-to-IGKV2D-30 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGKV2D-30 versus MZB1 in GBM, with a Pearson correlation of 0.62.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (IGKV2D-30→partner) and Y-score (partner→IGKV2D-30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMZB1 →+1.524+0.214<.001.004310
HNSCCD38 →+1.002+1.540<.001<.00139
OVIL16 →+0.721+2.538<.001<.00138
LSCCTXNDC5 →+0.654+1.593<.001<.00138
HNSCSEC11C →+1.295+1.651<.001<.00138
HNSCIRF4 →+1.020+1.595<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,769 associations by consensus.

IGKV2D-30 vs MZB1 — GBM

Per-sample scatter of IGKV2D-30 vs MZB1 in GBM (Pearson r = 0.62).

Explore this scatter interactively →

Exploration