IGKV2D-30

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV2D-30 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of IGKV2D-30’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGKV2D-30 RNA is repressed in tumor relative to normal tissue. In most cancer types IGKV2D-30 is over-expressed in tumor, although a few such as COAD and BRCA show the opposite, repressed pattern.

COAD, BRCA, and LUAD are the cancer types where IGKV2D-30 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV2D-30 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−2.822<.00110view →
BRCAFemaleII,III,IV−0.600<.0016view →
LUADAllAll+1.114<.0015view →
KIRCAllAll+0.386.0014view →
READAllAll−2.119<.0013view →
STADAllIV−3.576.0182view →
ESCAAllII,III,IV+3.115.0172view →
LIHCMaleAll−0.263.0252view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

IGKV2D-30–COAD

Tumor-vs-normal expression box plot for IGKV2D-30 RNA in COAD.

Open the COAD breakdown →

Exploration