IGKV2-38

associated omics data
immunoglobulin kappa variable 2-38 (pseudogene)Genealiases: []

Q-omics provides the consensus-scored IGKV2-38 profile across patient tissues and cancer cell-line models. IGKV2-38 expression is associated with patient survival in 6 of 34 cancer types, with the highest sampling consensus in STAD. Additionally, IGKV2-38 RNA expression shows 2,419 significant gene co-expression associations, with the highest sampling consensus in LUSC. Together, these results highlight STAD, and LUSC as cancer lineages where IGKV2-38 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2-38 survival associations across molecular data types. IGKV2-38 RNA expression shows survival associations in the most cancer types (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2-38 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier6STAD (72)view →
This table ranks reproducible IGKV2-38 RNA expression–survival associations across cancer types. High IGKV2-38 expression shows unfavorable associations in STAD, LUSC, COAD, UCEC, SARC and HNSC. The STAD Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify STAD as the clearest survival context for IGKV2-38 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
STADDFSTertileAll0.2570.661<.00172view →
LUSCOSTertileII,III,IV0.2500.778.00730view →
COADDFSTertileAll0.1670.781.00227view →
UCECDFSTertileAll0.0820.646.00918view →
SARCDFSTertileAll0.1590.614.00318view →
HNSCDFSTertileAll0.1680.663.0019view →
Pink = unfavorable, green = favorable. all 6 lineages →

IGKV2-38-STAD (DFS)

Kaplan–Meier survival curve for IGKV2-38 RNA expression in STAD: high vs low expression groups.

Explore this curve interactively →

Cross-omics associations

This table shows molecular features associated with IGKV2-38 in patient tissues and cancer cell lines. In patient samples, IGKV2-38 shows the broadest associations at the RNA and protein expression levels, with LUSC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA2,419LUSC (1600)view →
Function (RNA)1,070HNSC (539)view →