IGKV1OR2-108

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGKV1OR2-108 protein abundance is significantly associated with the RNA expression of many other genes, with 9,155 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IGKV1OR2-108-associated genes across cancer lineages are FANCE, FCRL5, and IGHV3-21. Each is linked with IGKV1OR2-108 in more than 4 cancer types. Because this analysis shows association rather than direction, both IGKV1OR2-108-to-partner and partner-to-IGKV1OR2-108 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGKV1OR2-108 versus FANCE in BRCA, with a Pearson correlation of -0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGKV1OR2-108→partner) and Y-score (partner→IGKV1OR2-108) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAFANCE →-0.935-0.575.003.00935
LSCCFCRL5 →+1.222+1.000<.001<.00134
LSCCIGHV3-21 →+1.127+0.858<.001<.00134
GBMIGKV3-20 →+1.455+0.433.003.00234
LSCCXPO5 →-0.598-0.569<.001.00334
OVIGKJ4 →+3.411+0.901.002.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,155 associations by consensus.

IGKV1OR2-108 vs FANCE — BRCA

Per-sample scatter of IGKV1OR2-108 vs FANCE in BRCA (Pearson r = -0.33).

Explore this scatter interactively →

Exploration