IGKV1D-33

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGKV1D-33 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible IGKV1D-33-associated genes across cancer lineages are RNU6-1040P, MIR515-2, and DPP10-AS2. Each is linked with IGKV1D-33 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGKV1D-33-to-partner and partner-to-IGKV1D-33 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1040P grouped by IGKV1D-33-low versus IGKV1D-33-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGKV1D-33→partner) and Y-score (partner→IGKV1D-33) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRNU6-1040P →+0.497+7.930<.001.00831
LUADMIR515-2 →+0.958+7.930<.001.00831
LUADDPP10-AS2 →+0.114+7.930<.001.00831
LUADRPS29P26 →+0.348+7.930<.001.00831
LUADRNU6-982P →+1.021+7.930<.001.00831
LUADRNU6-751P →+0.518+7.930<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

RNU6-1040P by IGKV1D-33 expression — LUAD

Box plot of RNU6-1040P in IGKV1D-33-low vs IGKV1D-33-high samples in LUAD.

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Exploration