IGKV1D-33

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV1D-33 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of IGKV1D-33’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGKV1D-33 RNA is repressed in tumor relative to normal tissue. In most cancer types IGKV1D-33 is over-expressed in tumor, although a few such as COAD and BRCA show the opposite, repressed pattern.

COAD, LUAD, and BRCA are the cancer types where IGKV1D-33 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV1D-33 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−1.524<.0018view →
LUADFemaleAll+1.550<.0017view →
BRCAFemaleII,III,IV−0.408.0016view →
KIRCAllAll+0.293.0054view →
READAllAll−1.617<.0013view →
ESCAFemaleAll+2.216.0251view →
LUSCAllAll+0.543.0301view →
THCAAllAll−0.341.0401view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

IGKV1D-33–COAD

Tumor-vs-normal expression box plot for IGKV1D-33 RNA in COAD.

Open the COAD breakdown →

Exploration