IGHV7-34-1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV7-34-1 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,576 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IGHV7-34-1-associated proteins across cancer lineages are DEF6, ARHGAP15, and SEPTIN6. Each is linked with IGHV7-34-1 in more than 5 cancer types. Because this analysis shows association rather than direction, both IGHV7-34-1-to-partner and partner-to-IGHV7-34-1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGHV7-34-1 versus DEF6 in GBM, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV7-34-1→partner) and Y-score (partner→IGHV7-34-1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMDEF6 →+0.684+0.241<.001.00636
GBMARHGAP15 →+0.714+0.144<.001.00536
LSCCSEPTIN6 →+0.373+0.545<.001<.00135
HNSCTAGAP_S400 →+0.549+0.576.001.00635
GBMWAS →+0.735+0.143<.001.00235
GBMWDFY4 →+0.494+0.219<.001.00835
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,576 associations by consensus.

IGHV7-34-1 vs DEF6 — GBM

Per-sample scatter of IGHV7-34-1 vs DEF6 in GBM (Pearson r = 0.36).

Explore this scatter interactively →

Exploration