IGHV3-66

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3-66 mutation is significantly associated with the RNA expression of many other genes, with 109 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IGHV3-66-associated genes across cancer lineages are MTND6P16, RNA5SP287, and RNA5SP404. Each is linked with IGHV3-66 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV3-66-to-partner and partner-to-IGHV3-66 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3-66→partner) and Y-score (partner→IGHV3-66) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMTND6P16 →+0.059+4.798<.001.00632
BRCARNA5SP287 →+0.283+8.471<.001.00532
BRCARNA5SP404 →+0.408+7.731<.001.00932
BRCAOR4X7P →+0.169+8.471<.001.00532
BRCARNU6-72P →+0.278+8.471<.001.00532
BRCAUBE2D3P4 →+0.078+7.731<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 109 associations by consensus.

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