IGHV3-63

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3-63 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,095 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IGHV3-63-associated GO terms across cancer lineages are Complement activation, Antimicrobial humoral response, and Antibacterial humoral response. Each is linked with IGHV3-63 in more than 29 cancer types. Because this analysis shows association rather than direction, both IGHV3-63-to-partner and partner-to-IGHV3-63 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Complement activation grouped by IGHV3-63-low versus IGHV3-63-high in THCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3-63→partner) and Y-score (partner→IGHV3-63) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
THCAComplement activation →+0.152+1.426<.001<.001330
THCAAntimicrobial humoral response →+0.108+1.489<.001<.001330
THCAAntibacterial humoral response →+0.168+1.546<.001<.001330
THCAHumoral immune response mediated by circulating immunoglobulin →+0.163+1.430<.001<.001329
SKCMB cell receptor signaling pathway →+0.082+1.227<.001<.001329
CHOLRegulation of B cell activation →+0.058+1.058<.001<.001329
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,095 associations by consensus.

Complement activation by IGHV3-63 expression — THCA

Box plot of Complement activation in IGHV3-63-low vs IGHV3-63-high samples in THCA.

Explore this box plot interactively →

Exploration