IGHV3-38

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV3-38 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated IGHV3-38 data layer compared with 26 for mass-spec protein and 3 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher IGHV3-38 mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated IGHV3-38 expression acts as an unfavorable survival marker, although some lineages such as CCRCC and LUAD show a favorable association.

CCRCC, LUAD, and UCEC are the cancer types where IGHV3-38 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCOSQuartileAll1.0000.554.00720view →
LUADDFSTertileII,III,IV1.0000.331.0099view →
UCECOSTertileAll0.9041.000.0266view →
HNSCOSMedianII,III,IV0.9521.000.0165view →
GBMDFSQuartileAll0.5400.213.0284view →
PDACOSTertileIII,IV0.5061.000.0491view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration