IGHV2-70

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV2-70 protein abundance is significantly associated with the RNA expression of many other genes, with 7,038 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible IGHV2-70-associated genes across cancer lineages are MEI1, BRI3BP, and IL16. Each is linked with IGHV2-70 in more than 2 cancer types. Because this analysis shows association rather than direction, both IGHV2-70-to-partner and partner-to-IGHV2-70 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGHV2-70 versus MEI1 in LSCC, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV2-70→partner) and Y-score (partner→IGHV2-70) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMEI1 →+0.747+0.659<.001.00133
LSCCBRI3BP →-0.491-0.513<.001.00233
GBMIL16 →+0.725+1.261<.001<.00133
LSCCPLEKHJ1 →-0.444-0.708<.001.00333
GBMIGHV1-69D →+1.377+1.168.001<.00133
PDACKPNA5 →+0.446+1.068<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,038 associations by consensus.

IGHV2-70 vs MEI1 — LSCC

Per-sample scatter of IGHV2-70 vs MEI1 in LSCC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration