IGF2-AS

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGF2-AS protein abundance is significantly associated with the RNA expression of many other genes, with 6,296 significant associations in total. GBM shows the largest number of these associations.

The most reproducible IGF2-AS-associated genes across cancer lineages are SPINT5P, TIMP1, and HOXA5. Each is linked with IGF2-AS in more than 2 cancer types. Because this analysis shows association rather than direction, both IGF2-AS-to-partner and partner-to-IGF2-AS results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGF2-AS versus SPINT5P in LUAD, with a Pearson correlation of -0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGF2-AS→partner) and Y-score (partner→IGF2-AS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADSPINT5P →-1.405-0.829.001.00333
OVTIMP1 →-0.987-0.972.001.00132
OVHOXA5 →-1.396-0.925<.001.00232
OVACTA2 →-2.259-1.405<.001<.00132
GBMASPA →-0.737-0.411.008.00532
CCRCCABCC3 →-0.666-0.248.003.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,296 associations by consensus.

IGF2-AS vs SPINT5P — LUAD

Per-sample scatter of IGF2-AS vs SPINT5P in LUAD (Pearson r = -0.33).

Explore this scatter interactively →

Exploration