IFNK

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFNK RNA expression is significantly associated with the protein abundance of many other proteins, with 8,614 significant associations in total. GBM shows the largest number of these associations.

The most reproducible IFNK-associated proteins across cancer lineages are PLAA, UBA7, and SAMHD1. Each is linked with IFNK in more than 3 cancer types. Because this analysis shows association rather than direction, both IFNK-to-partner and partner-to-IFNK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IFNK versus PLAA in LSCC, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (IFNK→partner) and Y-score (partner→IFNK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPLAA →+0.440+0.778<.001<.00134
HNSCUBA7 →+0.390+0.737<.001<.00134
HNSCSAMHD1 →+0.543+0.877<.001.00134
GBMCCDC88B_S1379 →+0.501+0.722.001.00234
LUADDHODH →-0.344-0.459<.001.00134
GBMAIF1 →+0.519+0.614.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,614 associations by consensus.

IFNK vs PLAA — LSCC

Per-sample scatter of IFNK vs PLAA in LSCC (Pearson r = 0.49).

Explore this scatter interactively →

Exploration