HTR5BP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HTR5BP protein abundance is significantly associated with the RNA expression of many other genes, with 794 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HTR5BP-associated genes across cancer lineages are SGCG, PCDHB2, and PRTN3. Each is linked with HTR5BP in more than 1 cancer types. Because this analysis shows association rather than direction, both HTR5BP-to-partner and partner-to-HTR5BP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HTR5BP versus SGCG in UCEC, with a Pearson correlation of -0.94.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HTR5BP→partner) and Y-score (partner→HTR5BP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSGCG →-1.595-0.750.009<.00132
UCECPCDHB2 →-2.690-0.815.002.00331
UCECPRTN3 →-0.385-0.788.001<.00131
UCECHRNR →-3.305-0.800.003.00631
UCECFLG-AS1 →-2.150-0.815<.001.00331
UCECPDCD5P2 →-1.065-0.788<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 794 associations by consensus.

HTR5BP vs SGCG — UCEC

Per-sample scatter of HTR5BP vs SGCG in UCEC (Pearson r = -0.94).

Explore this scatter interactively →

Exploration