HOXC10

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXC10 protein abundance is significantly associated with the RNA expression of many other genes, with 933 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible HOXC10-associated genes across cancer lineages are HOXC6, SLC5A1, and DHRS7. Each is linked with HOXC10 in more than 1 cancer types. Because this analysis shows association rather than direction, both HOXC10-to-partner and partner-to-HOXC10 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXC10 versus HOXC6 in BRCA, with a Pearson correlation of 0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXC10→partner) and Y-score (partner→HOXC10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAHOXC6 →+0.633+0.673<.001<.00132
LUADSLC5A1 →+1.669+1.824.002<.00131
LUADDHRS7 →+1.046+2.117.006.00431
LUADPLS3 →+2.116+2.153.001.00131
LUADGABRE →+1.686+1.545.009.00531
LUADCDADC1 →+0.459+2.103.003.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 933 associations by consensus.

HOXC10 vs HOXC6 — BRCA

Per-sample scatter of HOXC10 vs HOXC6 in BRCA (Pearson r = 0.36).

Explore this scatter interactively →

Exploration