HOXC-AS2

associated omics data
HOXC cluster antisense RNA 2Genealiases: []

Q-omics provides the consensus-scored HOXC-AS2 profile across patient tissues and cancer cell-line models. HOXC-AS2 expression is associated with patient survival in 26 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, HOXC-AS2 is differentially expressed in 13, with the highest sampling consensus in HNSC. Additionally, HOXC-AS2 RNA expression shows 14,140 significant gene co-expression associations, with the highest sampling consensus in KIRP. Together, these results highlight ACC, HNSC, and KIRP as cancer lineages where HOXC-AS2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes HOXC-AS2 survival associations across molecular data types. HOXC-AS2 RNA expression shows survival associations in the most cancer types (26). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
HOXC-AS2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier26ACC (137)view →
This table ranks reproducible HOXC-AS2 RNA expression–survival associations across cancer types. High HOXC-AS2 expression shows unfavorable associations in ACC, LGG and GBM, but favorable associations in KIRP, SKCM and ESCA. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for HOXC-AS2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSMedianAll0.3490.796<.001137view →
KIRPOSTertileII,III,IV0.8480.516.00284view →
LGGDFSMedianAll0.5960.837<.00154view →
GBMOSMedianAll0.3180.502.00122view →
SKCMOSMedianIV0.8360.253<.00121view →
ESCADFSMedianII,III,IV1.0000.303.00418view →
Pink = unfavorable, green = favorable. all 26 lineages →

HOXC-AS2-ACC (OS)

Kaplan–Meier survival curve for HOXC-AS2 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes HOXC-AS2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13. The strongest signals are observed in HNSC for RNA.
HOXC-AS2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13HNSC (12)view →
This table ranks reproducible tumor–normal expression differences for HOXC-AS2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. HOXC-AS2 shows lower tumor expression in KICH and higher tumor expression in HNSC, LUAD, STAD, BLCA and LUSC. The HNSC box plot shows higher HOXC-AS2 RNA expression in tumor versus normal tissue (log2 FC = +0.920, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+0.920<.00112view →
KICHMaleII,III,IV−2.051<.00111view →
LUADFemaleAll+0.564<.00110view →
STADMaleII,III,IV+1.176<.0018view →
BLCAAllAll+0.643<.0018view →
LUSCFemaleAll+1.480<.0017view →
Green = repressed in tumor. all 13 lineages →

HOXC-AS2-HNSC

Tumor-vs-normal expression box plot for HOXC-AS2 in HNSC.

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Cross-omics associations

This table shows molecular features associated with HOXC-AS2 in patient tissues and cancer cell lines. In patient samples, HOXC-AS2 shows the broadest associations at the RNA and protein expression levels, with KIRP recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA14,140KIRP (4314)view →
Protein (mass-spec)8,773LSCC (3428)view →