HOXC-AS1

associated omics data
HOXC cluster antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored HOXC-AS1 profile across patient tissues and cancer cell-line models. HOXC-AS1 expression is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, HOXC-AS1 is differentially expressed in 13, with the highest sampling consensus in HNSC. Additionally, HOXC-AS1 RNA expression shows 13,015 significant gene co-expression associations, with the highest sampling consensus in ACC. Together, these results highlight ACC, and HNSC as cancer lineages where HOXC-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes HOXC-AS1 survival associations across molecular data types. HOXC-AS1 RNA expression shows survival associations in the most cancer types (21). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
HOXC-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier21ACC (139)view →
This table ranks reproducible HOXC-AS1 RNA expression–survival associations across cancer types. High HOXC-AS1 expression shows unfavorable associations in ACC, LGG, COAD, MESO and LIHC, but favorable associations in KIRP. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for HOXC-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSMedianAll0.2890.811<.001139view →
LGGDFSTertileAll0.5300.817<.00154view →
KIRPOSTertileAll0.9730.873.00244view →
COADDFSMedianIV0.3350.645.00639view →
MESODFSTertileII,III,IV0.2980.497.02529view →
LIHCOSQuartileAll0.3700.616.01722view →
Pink = unfavorable, green = favorable. all 21 lineages →

HOXC-AS1-ACC (OS)

Kaplan–Meier survival curve for HOXC-AS1 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes HOXC-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13. The strongest signals are observed in HNSC for RNA.
HOXC-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13HNSC (11)view →
This table ranks reproducible tumor–normal expression differences for HOXC-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. HOXC-AS1 shows lower tumor expression in BRCA and KICH and higher tumor expression in HNSC, LUAD, LUSC and STAD. The HNSC box plot shows higher HOXC-AS1 RNA expression in tumor versus normal tissue (log2 FC = +1.063, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+1.063<.00111view →
LUADFemaleAll+0.681<.0019view →
BRCAFemaleAll−1.293<.0018view →
KICHMaleAll−2.460<.0017view →
LUSCFemaleAll+1.620<.0017view →
STADMaleAll+1.297<.0017view →
Green = repressed in tumor. all 13 lineages →

HOXC-AS1-HNSC

Tumor-vs-normal expression box plot for HOXC-AS1 in HNSC.

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Cross-omics associations

This table shows molecular features associated with HOXC-AS1 in patient tissues and cancer cell lines. In patient samples, HOXC-AS1 shows the broadest associations at the RNA and protein expression levels, with ACC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA13,015ACC (4570)view →
Protein (mass-spec)10,915LSCC (4012)view →