HMGN2P28

Across TCGA patient cohorts, HMGN2P28 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,110 significant associations in total. OV shows the largest number of these associations.

The most reproducible HMGN2P28-associated GO terms across cancer lineages are Golgi organization, Obsolete histone modification, and Ribosome-associated ubiquitin-dependent protein catabolic process. Each is linked with HMGN2P28 in more than 31 cancer types. Because this analysis shows association rather than direction, both HMGN2P28-to-partner and partner-to-HMGN2P28 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi organization grouped by HMGN2P28-low versus HMGN2P28-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P28→partner) and Y-score (partner→HMGN2P28) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Golgi organization →	+0.050	+0.532	<.001	<.001	3	32
ESCA	Obsolete histone modification →	+0.060	+0.740	<.001	<.001	3	31
DLBC	Ribosome-associated ubiquitin-dependent protein catabolic process →	+0.077	+0.490	<.001	<.001	3	31
LAML	Nuclear-transcribed mRNA poly(A) tail shortening →	+0.074	+0.905	<.001	<.001	3	31
DLBC	Regulation of nucleobase-containing compound transport →	+0.076	+0.494	.001	<.001	3	31
ESCA	Negative regulation of gene expression, epigenetic →	+0.063	+0.673	<.001	<.001	3	31

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,110 associations by consensus.

Golgi organization by HMGN2P28 expression — ESCA

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