HMGN1P33

Across TCGA patient cohorts, HMGN1P33 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,385 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGN1P33-associated GO terms across cancer lineages are Positive regulation of DNA repair, Protein-DNA complex assembly, and 'de novo' protein folding. Each is linked with HMGN1P33 in more than 12 cancer types. Because this analysis shows association rather than direction, both HMGN1P33-to-partner and partner-to-HMGN1P33 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA repair grouped by HMGN1P33-low versus HMGN1P33-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN1P33→partner) and Y-score (partner→HMGN1P33) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA repair →	+0.065	+0.196	<.001	<.001	3	13
ESCA	Protein-DNA complex assembly →	+0.060	+0.166	<.001	<.001	3	12
ESCA	'de novo' protein folding →	+0.067	+0.148	<.001	<.001	3	12
STAD	DNA double-strand break processing →	+0.061	+0.119	<.001	<.001	3	12
STAD	Nucleobase-containing compound transport →	+0.070	+0.175	<.001	<.001	3	11
STAD	Positive regulation of cell growth →	+0.050	+0.152	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,385 associations by consensus.

Positive regulation of DNA repair by HMGN1P33 expression — STAD

Explore this box plot interactively →