HM13-IT1

Across TCGA patient cohorts, HM13-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,674 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HM13-IT1-associated proteins across cancer lineages are RBM39, CSTF3, and BCAS1. Each is linked with HM13-IT1 in more than 3 cancer types. Because this analysis shows association rather than direction, both HM13-IT1-to-partner and partner-to-HM13-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HM13-IT1 versus RBM39 in LSCC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HM13-IT1→partner) and Y-score (partner→HM13-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RBM39 →	+0.241	+0.436	.003	.007	3	4
GBM	CSTF3 →	+0.204	+0.483	<.001	<.001	3	4
LSCC	BCAS1 →	-1.192	-0.589	<.001	<.001	3	4
GBM	NUP155 →	+0.155	+0.438	<.001	.002	3	3
GBM	PARP1 →	+0.299	+0.416	<.001	<.001	3	3
GBM	PARP4 →	-0.350	-0.375	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,674 associations by consensus.

HM13-IT1 vs RBM39 — LSCC

Explore this scatter interactively →